BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012F08SP1|AL426398
(763 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1687 455 e-128
3x_Contig706 234 3e-61
>3x_Contig1687
Length = 12800
Score = 455 bits (220), Expect = e-128
Identities = 378/462 (81%)
Strand = Plus / Plus
Query: 1 tctttcgatgtttctccctctkatctcttcgagcatgttgctgttgtttaccttttgatt 60
||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |
Sbjct: 12217 tctttcgatgtttctccctctgatctcttcgagcatgtagctgttgtttaccttttgaat 12276
Query: 61 tccgcttgctggttgccaaahhwwcccagcataaagcgntctncacgttcnntgtgnttc 120
|||| |||||||||||||| |||||||||||||| || ||||| | ||| |||
Sbjct: 12277 accgcatgctggttgccaaaaaaacccagcataaagcgatcaacacgtacaaagtgattc 12336
Query: 121 tgncttttktcagatgctgctktkccagacggttcctgggtyaggwcagatattcttctg 180
|| ||||| ||||||||||| | ||||||||||||||||| ||| |||| |||||||||
Sbjct: 12337 tgacttttgtcagatgctgcagtgccagacggttcctgggtcaggacagaaattcttctg 12396
Query: 181 ccattkttccgctgttacctcgtccncntgcgttggccagatktttcwkttaacagaact 240
||||| | ||||||| ||| ||||| | ||||| |||||||| | || | |||||||||
Sbjct: 12397 ccattgtgccgctgtaaccacgtccacatgcgtcggccagatgtatcagtaaacagaact 12456
Query: 241 cttantttttctccgtnttnttttcnnatncgttttcktwctgwtwtkcttcttgtcttt 300
|||| ||||||||||| || | ||| || ||| ||| | ||| | ||||||||||||
Sbjct: 12457 cttaatttttctccgtattatgttcgaatgcgtgttcgtactgaaatgcttcttgtcttt 12516
Query: 301 cctgtaccttgcwkttacctaawtkggcncncttttttcccntttacwaatkgtctktta 360
|||||||||||| | |||||| | ||| | || | ||||| ||||| ||| |||| |||
Sbjct: 12517 cctgtaccttgcagtgacctaaatgggcacactgtattcccatttacaaatggtctgtta 12576
Query: 361 kttcttttkawttcaatatggcnncttnnncnanccccnttnttttaaggtccttttttt 420
| ||||| | ||||||||||| ||| | | |||| || | | ||||||||||||||
Sbjct: 12577 gtacttttgaattcaatatggcaacttgaacaaaccccattgtgtaaaggtccttttttt 12636
Query: 421 tttwtctctctcgcwkttctkttggtcccttcttctttcwct 462
||| |||||||||| |||| |||||||||||||||||| ||
Sbjct: 12637 tttatctctctcgcagttctgttggtcccttcttctttcact 12678
>3x_Contig706
Length = 2070
Score = 234 bits (113), Expect = 3e-61
Identities = 125/129 (96%)
Strand = Plus / Plus
Query: 635 ttttcattagatcccatcggttgctgcctccgtcaagaattgatttctagttgaacgagt 694
||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 22 ttttcattagaacccatcggtagctgcctccgtcaagaattgatttcaagttgaacgagt 81
Query: 695 ttacacttcttttgagaaattaataatcataaagcagttgtttccgagtatactatggga 754
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 82 ttacacttcttttgagaaatttataatcataaagcagttgtttccgagtatactatggga 141
Query: 755 ggcttgaat 763
|||||||||
Sbjct: 142 ggcttgaat 150
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.43 0.719 1.35
Gapped
Lambda K H
1.43 0.719 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3275
Number of Sequences: 1807
Number of extensions: 3275
Number of successful extensions: 71
Number of sequences better than 1.0e-20: 2
length of query: 763
length of database: 10,358,551
effective HSP length: 16
effective length of query: 747
effective length of database: 10,329,639
effective search space: 7716240333
effective search space used: 7716240333
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.9 bits)
S1: 11 (23.2 bits)
S2: 48 (99.7 bits)